Stereochemical analysis of (hydroxyethyl)urea peptidomimetic inhibitors of gamma-secretase

J Med Chem. 2004 Dec 16;47(26):6485-9. doi: 10.1021/jm049566e.

Abstract

(Hydroxyethyl)urea peptidomimetics systematically altered at positions P2-P3' with hydrophobic D-amino acids were synthesized. An all D-amino acid containing analogue was identified that effectively blocked gamma-secretase activity in a cell-free system (IC50 = 30 nM). Systematic alteration of the stereocenters of a potent compound revealed interdependence between the various positions. Although typically less potent than their L-peptidomimetic counterparts, selected all D-amino acid containing analogues were equipotent to their counterparts in a cell-based assay when incubated for extended times.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acids / chemical synthesis*
  • Amino Acids / chemistry
  • Amino Acids / pharmacology
  • Amyloid Precursor Protein Secretases
  • Amyloid beta-Protein Precursor / biosynthesis
  • Amyloid beta-Protein Precursor / genetics
  • Animals
  • Aspartic Acid Endopeptidases
  • CHO Cells
  • Cell-Free System
  • Cricetinae
  • Cricetulus
  • Endopeptidases / chemistry
  • Endopeptidases / metabolism*
  • HeLa Cells
  • Humans
  • Molecular Mimicry
  • Peptides / chemistry*
  • Protease Inhibitors / chemical synthesis*
  • Protease Inhibitors / chemistry
  • Protease Inhibitors / pharmacology
  • Stereoisomerism
  • Structure-Activity Relationship
  • Transfection
  • Urea / analogs & derivatives*
  • Urea / chemical synthesis*
  • Urea / chemistry
  • Urea / pharmacology

Substances

  • Amino Acids
  • Amyloid beta-Protein Precursor
  • Peptides
  • Protease Inhibitors
  • Urea
  • Amyloid Precursor Protein Secretases
  • Endopeptidases
  • Aspartic Acid Endopeptidases
  • BACE1 protein, human